chore: deploy initial code base

This commit is contained in:
Thom Lamb
2026-05-12 10:34:59 -05:00
parent cbe3f6cc09
commit e826bf412b
257 changed files with 6137748 additions and 1 deletions
@@ -0,0 +1,39 @@
using System.Collections.Generic;
using System.Diagnostics.CodeAnalysis;
using System.IO;
using System.Linq;
using System.Reflection;
namespace Strata.RxNorm.Biz.Test.Unit.Extensions
{
[ExcludeFromCodeCoverage]
public static class ResourceExtensions
{
public static IEnumerable<string> LoadRxnNorm(this Assembly assembly, string fileName)
{
var path = assembly.resourceName(fileName);
return assembly.ReadAllResourceLines(path);
}
public static string resourceName(this Assembly assembly, string fileName)
=> assembly.GetManifestResourceNames().Single(str => str.EndsWith(fileName));
public static string[] ReadAllResourceLines(this Assembly assembly, string resourceName)
{
using Stream stream = assembly.GetManifestResourceStream(resourceName);
using StreamReader reader = new StreamReader(stream);
return EnumerateLines(reader).ToArray();
}
public static IEnumerable<string> EnumerateLines(TextReader reader)
{
string line;
while ((line = reader.ReadLine()) != null)
{
yield return line;
}
}
}
}
@@ -0,0 +1,40 @@
using Strata.RxNorm.Biz.RxNorm;
using System.Collections.Generic;
using System.Diagnostics.CodeAnalysis;
using System.Linq;
using System.Reflection;
namespace Strata.RxNorm.Biz.Test.Unit.Extensions
{
[ExcludeFromCodeCoverage]
public static class RxnAttributeExtension
{
public static IEnumerable<RxnAttribute> LoadRxnAttributes(this string fileName)
{
var assembly = Assembly.GetExecutingAssembly();
var lines = assembly.LoadRxnNorm(fileName);
return lines.Select(l => l.AttributeCtor()).ToList();
}
public static RxnAttribute AttributeCtor(this string line, string separator = "|")
{
var data = line.Split(separator).ToArray();
var r = new RxnAttribute();
r.Rxcui = data[0];
r.Lui = data[1];
r.Sui = data[2];
r.Rxaui = data[3];
r.Stype = data[4];
r.Code = data[5];
r.Atui = data[6];
r.Satui = data[7];
r.Atn = data[8];
r.Sab = data[9];
r.Atv = data[10];
r.Suppress = data[11];
r.Cvf = data[12];
return r;
}
}
}
@@ -0,0 +1,46 @@
using Strata.RxNorm.Biz.RxNorm;
using System.Collections.Generic;
using System.Diagnostics.CodeAnalysis;
using System.Linq;
using System.Reflection;
namespace Strata.RxNorm.Biz.Test.Unit.Extensions
{
[ExcludeFromCodeCoverage]
public static class RxnConceptExtension
{
public static IEnumerable<RxnConcept> LoadRxnConcepts(this string fileName)
{
var assembly = Assembly.GetExecutingAssembly();
var lines = assembly.LoadRxnNorm(fileName);
return lines.Select(l => l.ConceptCtor()).ToList();
}
public static RxnConcept ConceptCtor(this string line, string separator = "|")
{
var data = line.Split(separator).ToArray();
var r = new RxnConcept();
r.Rxcui = data[0];
r.Lat = data[1];
r.Ts = data[2];
r.Lui = data[3];
r.Stt = data[4];
r.Sui = data[5];
r.IsPref = data[6];
r.Rxaui = data[7];
r.Saui = data[8];
r.Scui = data[9];
r.Sdui = data[10];
r.Sab = data[11];
r.Tty = data[12];
r.Code = data[13];
r.Str = data[14];
r.Srl = data[15];
r.Suppress = data[16];
r.Cvf = data[17];
return r;
}
}
}
@@ -0,0 +1,43 @@
using Strata.RxNorm.Biz.RxNorm;
using System.Collections.Generic;
using System.Diagnostics.CodeAnalysis;
using System.Linq;
using System.Reflection;
namespace Strata.RxNorm.Biz.Test.Unit.Extensions
{
[ExcludeFromCodeCoverage]
public static class RxnRelationExtension
{
public static IEnumerable<RxnRelation> LoadRxnRelations(this string fileName)
{
var assembly = Assembly.GetExecutingAssembly();
var lines = assembly.LoadRxnNorm(fileName);
return lines.Select(l => l.RelationCtor()).Where(r => !string.IsNullOrEmpty(r.Rxcui1)).ToList();
}
public static RxnRelation RelationCtor(this string line, string separator = "|")
{
var data = line.Split(separator).ToArray();
var r = new RxnRelation();
r.Rxcui1 = data[0];
r.Rxaui1 = data[1];
r.SType1 = data[2];
r.Rel = data[3];
r.Rxcui2 = data[4];
r.Rxaui2 = data[5];
r.SType2 = data[6];
r.Rela = data[7];
r.Rui = data[8];
r.Srui = data[9];
r.Sab = data[10];
r.Sl = data[11];
r.Rg = data[12];
r.Dir = data[13];
r.Suppress = data[14];
r.Cvf = data[15];
return r;
}
}
}
@@ -0,0 +1,52 @@
using NUnit.Framework;
using System;
using System.Diagnostics.CodeAnalysis;
using System.Text.RegularExpressions;
using VerifyTests;
namespace Strata.RxNorm.Biz.Test.Unit.Extensions
{
[ExcludeFromCodeCoverage]
public static class TestExtensions
{
/// <summary>
/// The test name
/// </summary>
/// <param name="context"></param>
/// <returns>
/// The name of the test split by camel case for a max length of 200 characters.
/// </returns>
public static string TestName(this TestContext context, string suffix = "")
{
var testName = context.Test.Name.Replace("\"", "_");
testName = suffix == string.Empty
? $"{testName}".SplitCamelCase()
: $"{testName} - {suffix}".SplitCamelCase();
testName = testName[..Math.Min(200, testName.Length)];
return testName;
}
public static string SplitCamelCase(this string input)
{
if (string.IsNullOrEmpty(input)) { return input; }
const string pattern = "([a-z](?=[A-Z])|[A-Z](?=[A-Z][a-r + t-z])|[A-Z](?=[A-Z][s][a-z]))";
if (input.StartsWith("FY", StringComparison.Ordinal))
{ // hack for FY2012, etc
return "FY " + Regex.Replace(input.Remove(0, 2), pattern, "$1 ");
}
input = Regex.Replace(input, @"\{|\}|:|,|\)|\(", "", RegexOptions.Singleline | RegexOptions.IgnoreCase);
return Regex.Replace(input, pattern, "$1 ");
}
public static VerifySettings TestSettings()
{
var settings = new VerifySettings();
settings.UseDirectory("Snapshots");
settings.ScrubInlineGuids();
return settings;
}
}
}